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www.darwincenter.nl
Dr. ir. E. C. Hopmans (Ellen)

Darwin Center member

Royal Netherlands Institute for Sea Research (NIOZ)

Researchgroup: Marine Organic Biogeochemistry

Phone 1: (+31) (0)222-369432
Phone 2: (+31) (0)222-369300
Fax: (+31) (0)222-319674
E-mail:

Visiting address:
Landsdiep 4
1797 SZ 't Horntje (Texel)
The Netherlands
Office C10-04		Postal address:
P.O. Box 59
1790 AB Den Burg (Texel)
The Netherlands

Dr. ir. E. C. Hopmans (Ellen)

Darwin Center member

Royal Netherlands Institute for Sea Research (NIOZ)

Researchgroup: Marine Organic Biogeochemistry

Phone 1: (+31) (0)222-369432
Phone 2: (+31) (0)222-369300
Fax: (+31) (0)222-319674
E-mail:

Visiting address:
Landsdiep 4
1797 SZ 't Horntje (Texel)
The Netherlands
Office C10-04		Postal address:
P.O. Box 59
1790 AB Den Burg (Texel)
The Netherlands


Darwin Center publications
Sinninghe Damsté, J.S., Rijpstra, W.I.C., Hopmans, E.C., Schouten, S., Balk, M., Stams, A.J.M. (2007). Structural characterization of diabolic acid-based tetraester, tetraether and mixed ether/ester, membrane-spanning lipids of bacteria from the order Thermotogales . Archives of Microbiology pp 629-641188 (6): 629-641.
Darwin Center authors: Balk M., Hopmans E. C., Schouten S., Sinninghe Damsté J. S., Stams A. J. M.

Bauersachs, T., Compaore, J., Hopmans, E.C., Stal, L.J., Schouten, S., Sinninghe Damsté, J.S. (2009). Distribution of heterocyst glycolipids in cyanobacteria. Phytochemistry70 (17-18): 2034-2039.
Darwin Center authors: Bauersachs T., Compaore J., Hopmans E. C., Schouten S., Sinninghe Damsté J. S., Stal L. J.

Jaeschke, A., Op den Camp, H.J.M., Harhangi, H., Klimiuk, A., Hopmans, E.C., Jetten, M.S.M., Schouten, S., Sinninghe Damsté, J.S. (2009). 16S rRNA gene and lipid biomarker evidence for anaerobic ammonium-oxidizing bacteria (anammox) in California and Nevada hot springs. FEMS Microbiology Ecology67 (3): 343-350.
Darwin Center authors: op den Camp H. J. M., Hopmans E. C., Jetten M. S. M., Schouten S., Sinninghe Damsté J. S.

Pitcher, A., Hopmans, E.C., Schouten, S., Sinninghe Damsté, J.S. (2009). Separation of core and intact polar archaeal tetraether lipids using silica columns: Insights into living and fossil biomass contributions . Organic Geochemistry40 (1): 12-19.
Darwin Center authors: Hopmans E. C., Pitcher A., Schouten S., Sinninghe Damsté J. S.

Bauersachs, T., Hopmans, E.C., Compaoré, J., Stal, L.J., Schouten, S., Sinninghe Damsté, J.S. (2009). Rapid analysis of long-chain glycolipids in heterocystous cyanobacteria using high-performance liquid chromatography coupled to electrospray ionization tandem mass spectrometry . Rapid Communications in Mass Spectrometry23 (9): 1387-1394.
Darwin Center authors: Bauersachs T., Compaore J., Hopmans E. C., Schouten S., Sinninghe Damsté J. S., Stal L. J.

Bauersachs, T., Speelman, E.N., Hopmans, E.C., Reichart, G.J., Schouten, S., Sinninghe Damsté, J.S. (2010). Fossilized glycolipids reveal past oceanic N2 fixation by heterocystous cyanobacteria. Proceedings of the National Academy of Sciences USA (PNAS)107: 19190-19194.
Darwin Center authors: Bauersachs T., Hopmans E. C., Reichart G. J., Schouten S., Sinninghe Damsté J. S., Speelman E. N.

Pitcher A., Rychlik N., Hopmans E.C., Spieck E., Rijpstra I.C., Ossebaar J., Wagner M., Schouten S., Sinninghe Damsté J.S. (2010). Crenarchaeol dominates the membrane lipids of "Candidatus Nitrososphaera gargensis", a thermophilic Group I.1b Archaeon. ISME Journal542-552.
Darwin Center authors: Hopmans E. C., Pitcher A., Schouten S., Sinninghe Damsté J. S.

Rush D., Jaeschke A., Hopmans E.C., Geenevasen J.A.J., Schouten S., Sinninghe Damsté J.S (2011). Short chained ladderanes in sediments: oxic biodegradation products of anammox lipids. Geochimica Cosmochimica Acta75: 1662-1671.
Darwin Center authors: Hopmans E. C., Rush D., Schouten S., Sinninghe Damsté J. S.

Francien Peterse, Ellen Hopmans, Stefan Schouten, Anchélique Mets, Irene Rijpstra, Jaap Sinninghe Damsté (2011). Identification and distribution of intact polar branched tetraether lipids in peat and soil. Organic Geochemistry42: 1007-1015.
Darwin Center authors: Hopmans E. C., Peterse F., Schouten S.

Pitcher, A., Hopmans, E.C., Mosier, A.C., Park, S.J., Rhee, S-.K., Francis, C.A., Schouten, S., Sinninghe Damsté, J.S. (2011). Core and intact polar glycerol dibiphytanyl glycerol tetraether lipids of ammonia-oxidizing Archaea enriched from marine and estuarine sediments.. Appl. Env. Microbiol.77: 3468-3477.
Darwin Center authors: Hopmans E. C., Pitcher A., Schouten S., Sinninghe Damsté J. S.

T. BAUERSACHS, J. COMPAORE, I. SEVERIN, E. C. HOPMANS, S. SCHOUTEN, L. J. STAL AND J. S. SINNINGHE DAMSTE (2011). Diazotrophic microbial community of coastal microbial mats of the southern North Sea. Geobiology9: 349-359.
Darwin Center authors: Bauersachs T., Compaore J., Hopmans E. C., Schouten S., Sinninghe Damsté J. S., Stal L. J.

Pitcher, A., Villanueva, L., Hopmans, E.C. , Schouten, S., Reichart, G.-J., Sinninghe Damsté, J.S. (2011). Niche segregation of ammonia-oxidizing archaea and anammox bacteria in the Arabian Sea oxygen minimum zone . ISME JournalVolume 5, Issue 12: 1896-1904.
Darwin Center authors: Hopmans E. C., Pitcher A., Reichart G. J., Schouten S., Sinninghe Damsté J. S., Villanueva L.

Pitcher A., Hopmans E.C., Mosier A.C., Park S.J., Rhee S-.K., Francis C.A., Schouten S., Sinninghe Damsté J.S. (2011). Core and intact polar glycerol dibiphytanyl glycerol tetraether lipids of ammonia-oxidizing Archaea enriched from marine and estuarine sediments.. Applied and Environmental Microbiology77: 3468-3477.
Darwin Center authors: van Boxel J. H., Hopmans E. C., Pitcher A., Schouten S., Sinninghe Damsté J. S.

Lengger, S.K., Hopmans, E.C., Sinninghe Damsté, J.S., Schouten, S. (2012). Comparison of extraction and work up techniques for analysis of core and intact polar tetraether lipids from sedimentary environments. Organic Geochemistry47: 34-40.
Darwin Center authors: Hopmans E. C., Lengger S., Schouten S., Sinninghe Damsté J. S.

Rush D., Hopmans E.C., Wakeham S.G., Schouten S., Sinninghe Damsté J.S. (2012). Occurrence and distribution of ladderane oxidation products in different oceanic regimes.. Biogeosciences9: 2407-2418.
Darwin Center authors: Hopmans E. C., Rush D., Schouten S., Sinninghe Damsté J. S.

Rush D., Wakeham S.G., Hopmans E.C., Schouten S., Sinninghe Damsté J.S. (2012). Biomarker evidence for anammox in the oxygen minimum zone of the Eastern Tropical North Pacific. Organic Geochemistry53: 80-87.
Darwin Center authors: Hopmans E. C., Rush D., Schouten S., Sinninghe Damsté J. S.

Lengger, S.K., Hopmans, E.C., Reichart, G.-J., Sinninghe Damsté, J.S., Schouten, S. (2012). Intact polar and core glycerol dibiphytanyl glycerol tetraether lipids in the Arabian Sea Water Oxygen Minimum Zone: II. Selective preservation and degradation in sediments and consequences for the TEX86.. Geochimica.et Cosmochimica Acta98: 244-258.
Darwin Center authors: Hopmans E. C., Lengger S., Reichart G. J., Schouten S., Sinninghe Damsté J. S.

Brandsma J., Hopmans E.C., Brussaard C.P.D., Witte H.J., Schouten S., Sinninghe Damsté J.S. (2012). Spatial distribution of intact polar lipids in North Sea surface waters: Relationship with environmental conditions and microbial community composition. Limn. Oceanograph57: 959-973.
Darwin Center authors: Brussaard C. P. D., Hopmans E. C., Schouten S., Sinninghe Damsté J. S.

Brandsma J., Hopmans E.C., Philippart C.J.M., Veldhuis M.J.W., Schouten S. and Sinninghe Damsté J.S. (2012). Low temporal variation in the intact polar lipid composition of North Sea coastal marine water reveals limited chemotaxonomic value. Biogeosciences9: 1073-1084.
Darwin Center authors: Hopmans E. C., Schouten S., Sinninghe Damsté J. S.

Schouten S., Pitcher A., Hopmans E.C., Villanueva L., van Bleijswijk J., and Sinninghe Damsté J.S. (2012). Intact polar and core glycerol dibiphytanyl glycerol tetraether lipids in the Arabian Sea oxygen minimum zone: I. Selective preservation and degradation in the water column and its consequences for the TEX86.. Geochim. Cosmochim. Acta98: 228-243.
Darwin Center authors: Hopmans E. C., Pitcher A., Schouten S., Sinninghe Damsté J. S., Villanueva L.

Tierney, J.E., Schouten, S., Pitcher, A., Hopmans, E.C., Sinninghe Damsté, J.S. (2012). Core and intact polar glycerol dialkyl glycerol tetraethers (GDGTs) in Sand Pond, Warwick, Rhode Island (USA): Insights into the origin of lacustrine GDGTs. Geochimica et Cosmochimica Acta77: 561-581.
Darwin Center authors: Hopmans E. C., Pitcher A., Schouten S., Sinninghe Damsté J. S.

Lengger, S.K. Hopmans, E.C. Sinninghe Damsté, J.S. Schouten, S (2014). Fossilization and degradation of archaeal intact polar tetraether lipids in deeply buried marine sediments ( Peru Margin). Geobiology12: 212-220.
Darwin Center authors: Hopmans E. C., Lengger S., Schouten S., Sinninghe Damsté J. S.

Lengger, S.K. Hopmans, E.C. Sinninghe Damsté, J.S. LneSchouten, S (2014). Impact of sedimentary degradation and deep water column production on GDGT abundance and distribution in surface sediments in the Arabian Sea: Implications for the TEX86 paleothermometer. Geochimica et Cosmochimica Acta142: 386-399.
Darwin Center authors: Hopmans E. C., Lengger S., Schouten S., Sinninghe Damsté J. S.

Y.A.. Lipsewers N.J. Bale E.C. Hopmans S. Schouten J.S. Sinninghe Damsté L. Villanueva (2014). Seasonality and depth distribution of the abundance and activity of ammonia oxidizing microorganisms in marine coastal sediments (North Sea). Frontiers in microbiology5 (471): 1-12.
Darwin Center authors: Hopmans E. C., Lipsewers A., Schouten S., Sinninghe Damsté J. S., Villanueva L.

Sollai M. Hopmans E.C. Schouten S. Keil R.G. Sinninghe Damsté J.S. (2015). Intact polar lipids of Thaumarchaeota and anammox bacteria as indicators of N cycling in the eastern tropical North Pacific oxygen-deficient zone. Biogeosciences12: 4725-4737.
Darwin Center authors: Hopmans E. C., Schouten S., Sinninghe Damsté J. S., Sollai M.

Sollai, M. Hopmans, E.C. Schouten, S. Keil, R.G. Sinninghe Damsté, J.S. (2015). Intact polar lipids of Thaumarchaeota and anammox bacteria as indicators of N cycling in the eastern tropical North Pacific oxygen-deficient zone. Biogeosciences12: 4725-4737.
Darwin Center authors: Hopmans E. C., Schouten S., Sinninghe Damsté J. S., Sollai M.

Moore, E.K.; Hopmans, E.C.; Rijpstra, W.I.C.; Sánchez-Andrea, I.; Villanueva, L.; Wienk, H.; Schoutsen, F; Stams, A.J.M.; Sinninghe Damsté, J.S. (2015). Lysine and novel hydroxylysine lipids in soil bacteria: amino acid membrane lipid response to temperature and pH in Pseudopedobacter saltans.. Front. Microbiol.6: 637-
Darwin Center authors: Hopmans E. C., Moore E.K., Sinninghe Damsté J. S., Stams A. J. M., Villanueva L.